BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C01SP1|AL427587
(1029 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig733 1857 0.0
>3x_Contig733
Length = 3667
Score = 1857 bits (929), Expect = 0.0
Identities = 1009/1032 (97%), Gaps = 9/1032 (0%)
Strand = Plus / Minus
Query: 1 tagncttcttattttcatggtaatccaataccaagtacgcctctctaagggtactcacca 60
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2395 tagtcttctttttttcatggtaatccaataccaagtacgcctctctaagggtactcacca 2336
Query: 61 tctwtkgaaccatatttggggccatcatattcaggaaggttatgacccaattgtttcaat 120
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2335 -ctatggaaccatatttggggccatcatattcaggaaggttatgacccaattgtttcaat 2277
Query: 121 gtgccctcgattgtcttatgagtcttgatatgagcacgatacttaacaggtctctccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2276 gtgccctcgattgtcttatgagtcttgatatgagcacgatacttaacaggtctctccaaa 2217
Query: 181 aggctgttgatactatcaatggattgavgtaaagtgcttatattggaatcaattacaggt 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2216 aggctgttgatactatcaatggattgaagtaaagtgcttatattggaatcaattacaggt 2157
Query: 241 tctttcataattaacgctggagttggtaactccttatratgcctccctttgtaggcattt 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2156 tctttcataattaacgctggagttggtaactccttataatgcctccctttgtaggcattt 2097
Query: 301 cggatggattcctgtacacctgcaggatcgagtggatatctctcagatggactcaattgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2096 cggatggattcctgtacacctgcaggatcgagtggatatctctcagatggactcaattgc 2037
Query: 361 gtasc-attggcggtctctatcactggttggagcctttgatagattggacactctttgat 419
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2036 gtagccattggcggtctctatcactggttggagcctttgatagattggacactctttgat 1977
Query: 420 agattggacactcatgcaaagaaatgtgacaggtgcaagatggtttctcattatatayvc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1976 agattggacactcatgcaaagaaatgtgacaggtgcaagatggtttctcattatatatac 1917
Query: 480 mtbaggtgcctggcttggcagccaaaaaaaattgagatgttttatctctcagatttctga 539
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1916 attaggtgcctggcttggcagccaaaaaaaattgagatgttttatctctcagatttctga 1857
Query: 540 ggggtagatatgagattacaaaattctggccacattaaatccaccttacgcttccttctc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1856 ggggtagatatgagattacaaaattctggccacattaaatccaccttacgcttccttctc 1797
Query: 600 agccgcagttcattgtgtaactttctgctgcctgacaatacgaatacgaatgcgaagatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1796 agccgcagttcattgtgtaactttctgctgcctgacaatacgaatacgaatgcgaagatg 1737
Query: 660 tgttatcaagcaagtgacaggaaacaatgatacatcctcttggctatcgaragtcgacac 719
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1736 tgttatcaagcaagtgacaggaaacaatgatacatcctcttggctatcgaaagtcgacac 1677
Query: 720 tggcttgcagtacataaacattcgccggtttttataagattattcttcgaacgataaaac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1676 tggcttgcagtacataaacattcgccggtttttataagattattcttcgaacgataaaac 1617
Query: 780 gatgtgatgatcttaaaacgaaaatgacgtattctgtatcatttcccctcctctcgagca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1616 gatgtgatgatcttaaaacgaaaatgacgtattctgtatcatttcccctcctctcgagca 1557
Query: 840 agagaatatcacggaatggctaattcttatatattaggttgttggtgccgc-gtaccatg 898
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1556 agagaatatcacggaatggctaattcttatatattaggttgttggtgccgcagtaccatg 1497
Query: 899 tgcgata-sggatattccaaaatacccactagaaccaaaaccc-agargggt-cagacgt 955
||||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 1496 tgcgatagcggatattccaaaatacccactagaaccaaaacccaagaagggtccagacgt 1437
Query: 956 ttcttggtgcctttcgactttttgtttttgttttg-cgttctggtctaggta-gaatgaa 1013
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 1436 ttcttggtgcctttcgactttttgtttttgttttgccgttctggtctaggtacgaatgaa 1377
Query: 1014 gg-acatgaaaa 1024
|| |||||||||
Sbjct: 1376 ggaacatgaaaa 1365
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6572
Number of Sequences: 1807
Number of extensions: 6572
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 1029
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1013
effective length of database: 10,329,639
effective search space: 10463924307
effective search space used: 10463924307
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)